id stringlengths 36 36 | question stringlengths 148 3.09k | ideal stringlengths 1 129 | distractors listlengths 3 3 | subtask stringclasses 15
values | source stringclasses 3
values |
|---|---|---|---|---|---|
526189b3-504f-42cd-bc03-9d1e60b05132 | What is the percent GC of the DNA sequence GGGCTTCGAGTTCGGTGACGCCCACTCTGCGAAAGAGCTGTAACAACCCGTGCCTGCTCATCCCGAACTGCGTCATGGCGTCATCAAATGCTTGCGCTGGGTGGGAGTGGCACTGGAAAAAACCCAGCACGCGAACCACTTGCGCGTGGTCGGCAACGCGATGGGATGTGCGTTCGGGAATACGGCGATTGGTTCTTTTGATCAAGGCCGGCGCGTGCGGCAATCCCTTTTTCACTGCATCCAGCGCAGGACGTCCGCCGAGGCAGGCCAAGGCGAC... | 64 | [
"128",
"63",
"61"
] | Prop-seq-gcpercent | hf-carbon/natural-plasmids |
b0df2d01-91dc-4a44-bbe4-a3c2e200b602 | What is the percent GC of the DNA sequence GCTGCACTCCGGACCCCGCCAACACATCACGGGCCACAAAATTTTTTGTGGCCCGCTCTGCGTTTTCTAAGTGTTATCCCTCCTGACTTCTAAAAAATTTTCCACCTGAACTTGACAGAAAAAACGATGACGGGTACTTTTTGATCTGTACATAAAACCAGTGGTTTTATGTACAGTATTAATCATGTAATTAATTGTTTTAACGCTTAAAAGAGGGACTTTTATGAGCGGTGGAGATGGACGCGGCCATAACACGGGCGCGCATAGCACAAGTGGT... | 46 | [
"47",
"92",
"45"
] | Prop-seq-gcpercent | hf-carbon/natural-plasmids |
5062dbcc-408f-4e52-953a-df1546d62332 | What is the percent GC of the DNA sequence TGCCGGACGGAGCTTTGGCCCTGGTGTATCAGGGAATCCTGGCAGGCGTGGAAAGCGACACCATACAAAATCACCTGGCTCAGGCAGTTGTGGAAAAGGTTTAGTGGTAGTTGCCATCTTCTCTCCTTATAAAAGAGTTTTATTAAATCGCTCCTCCGATTTACCGCTTGCCGTTGAGGCTTCACGAATAGCCTGGATTTGAGCAGTGGTGAGTGGACCATCATCTTTTTCGTAATGCGGCAGATAGGCATCAGCCAGCTTACGAAGAGCCAAGTGG... | 50 | [
"47",
"48",
"100"
] | Prop-seq-gcpercent | hf-carbon/natural-plasmids |
23c31f79-2a2f-4c7f-97ff-04b555633f7c | What is the percent GC of the DNA sequence ATCAAAAGAGAAATGCAAATCGGTGAGCTATTTGATGAATTGGTCATGCCACTACTATGTAATACTGCTGATTTTATACACTTACTACCGGCTTCTGAAGCACATCACCACAGAGCTCAAGGAGGGCTTTTACGACACAGTTTAGAAGTCTGTTACATCGCAGTTAAGCACACAAAGACCACTGACTTTGATAGCAATGAAACCCCTGAAGAACGGTCTGCTAACGCTTTGAAATGGCGTCTTGCAGTGGCTGTAACAGCATTACTGCACGACATTG... | 43 | [
"44",
"40",
"41"
] | Prop-seq-gcpercent | hf-carbon/natural-plasmids |
c44a3d0e-ee72-4209-ad84-3bc1d72e19d6 | What is the percent GC of the DNA sequence AAAACGTCTGAGCTGCCACGGTTCCGGCAGCGCCTTGAGCGCAACCGGAAACCGTCTGGGGAGAACCCCAGACCCCCATCGCTGTAACATCGACGGTCTACGACCACCAACCAGCTGAATAGCTGCCAGTGCCGTGCAAATGGGCTTTGCAGGGGGCTGACGCGGTTCCTGGCGACCTGAAAGCCCCTGGTTAGGGGTATCGGCGCGCCTGACCTCCTGAAACCCTCTGTAAGCGTTTTTCGCGCCTTCCATGCCCTGACGGGCATTTAAAACCCGT... | 57 | [
"28",
"55",
"60"
] | Prop-seq-gcpercent | hf-carbon/natural-plasmids |
8e227958-5abf-4216-9a45-c7415b9eec63 | How many fragments should I expect to see when I digest the sequence AGTAGCTTCTTGTTGTCCTCTTCATCCTCAGAAAGGCGAGGAAAACCTGGTCGCAAGGTCAATCTAACAGCACACGATGAGTAACCGCCGTGCTTGTTTTTTTGCCCAGACACACCAAAGCCACCTTCACTAATTTTCTTAATCATCCACTGGTTTTCTTCTTTGTCGTAAAGAATGTCGACACGATCCCCAATGGTAATACCAGTCTCGTCCATAGCGCTCTTGCTCAAGCGGAATCCCAGCTCGACAGC... | 2 | [
"5",
"0",
"1"
] | RE-seq-numfrags | hf-carbon/natural-plasmids |
257fc0b5-9f61-44c5-9e11-b7c935164607 | How many fragments should I expect to see when I digest the sequence ACTCTGGAGGAAAGCCACTGGCGGAAATGGACTCAGTCCCGAACCCTCAAGTTGCAGAACCCGTTTAAGCAAAACCAGGGGCACATCAGGGCTATTCAGTCTGCTCTTAAGGCTAGAGAACTGGAATGTATCAATGTCGTCATCATAAACGGACGTTGTAAGTTTGATGGCATCAAGCCGGAATGGTTATGTATGGGGATGGACGATTTTATCCATAAAGTCAAACAACGACGAGGGCTACGGTTGTTCAC... | 2 | [
"3",
"0",
"1"
] | RE-seq-numfrags | hf-carbon/natural-plasmids |
0f88eff9-e2be-4946-b3dc-c83aa7a899be | How many fragments should I expect to see when I digest the sequence TGACGAAACGTTTCTTTCCCGTTACCTCCAGAATGCTGACCAGCGGGCCCAGGTGATGAAGGTACTGCATGAGCGGGAAAAAGCCCTGACGCACCGTGTCACCGATTCAGTTGGCCGCTTTGCCGGCTTCACGCACGTCATGGTTGTCGGTGGCGGCGCCAGCCTGGTCGCCGGCGCAGTGAAGCAGGCCACGGGGGTGAGTGACGATCGTTTCTTCGTCAGTGATAACCCGCAGTTCGATCTGGTTCTGG... | 2 | [
"0",
"4",
"3"
] | RE-seq-numfrags | hf-carbon/natural-plasmids |
34d33cec-a1e3-453a-9b28-ff34993cc08e | How many fragments should I expect to see when I digest the sequence ATTACAAATGTATCTAGCCTACTAACACAAAAAAGGAAAAAAGACATACTAGAAAACTTAAAAAAAATAGATGACAGAATTGTAGATATAGCAATATCTGCGATAGGTAACAATAAGGAAATATATTTAGACATTGGATTTAGTGAGCTAAATGAAATATCAATGCTTGGCGAGGGTATCAGTCGAGCATTATCTTTTATCAGCTCAGTGCTGGTACAGGAAAACTCAATTATTCTTATTGATGAAATCGA... | 3 | [
"5",
"4",
"2"
] | RE-seq-numfrags | hf-carbon/natural-plasmids |
892ad1ba-0cc3-4839-999e-c8c494aae22f | How many fragments should I expect to see when I digest the sequence AATGAATTTCCTGCATTTGAACCTGATTCAAATGGTATTGAGTTTCAAGATACCGTTAAGCCACAAGCAGATGAAACCGTAATTGTTAAAAATTACGTCAACTCATTCTTAAATACGAATCTCAAACAAGTCTTAGATACAAATGATGTAACTGAATTAGTCATCATTGGTGCTATGAGCCATATGTGTGTTGATGCTGCTGTACGTGCTGCTTCTGATTTTGGTTATAAGGTAAAAGTGATTCATGATGC... | 4 | [
"1",
"7",
"6"
] | RE-seq-numfrags | hf-carbon/natural-plasmids |
0d74455f-61ca-49c8-a610-d8ecf640f162 | What are the lengths of fragments produced when the sequence GGTGAATACCGGAGGGAACAAAAGGCAGGTCCCCGCAAAACGTCAAAACCGCGGCTCCCGAAACTCAACAGATGATGGGGGCTGAAAACATCAACAGAAGGAGACACATCATGGCAGTTCGTGGCATTAACAAGGTCATTCTTGTCGGTCGTCTGGGAAAAGATCCGGAAGTCCGTTACATCCCCAACGGGGGCGCAGTGGCAAACCTGCAGGTGGCCACGTCAGAAACCTGGCGCGACAAACAGACGGGGGAAATGAA... | 212, 415, 267 | [
"212, 415, 217",
"192, 415, 267",
"212, 365, 267"
] | RE-seq-lenfrags | hf-carbon/natural-plasmids |
7cffdbb9-feb5-4436-96f6-d0648aa1f079 | What are the lengths of fragments produced when the sequence AAAATCAGCAGCGGAAGACTTTGCGAAGGCAGTCTTTGATCGCATCGAGTTCATTCGTACTAACGGAGGTATGTGATGTCGAATGAGAAAAGAAAAACCATCGGCAGACAGTTAAATACCCAGGCGTCAATTGCGGAAATGACGGACACCGGTAGAAGCCAGGTATTTACCTTAAAAACCGGCAGGAAGGTAACGTTCAGGTTTGTTCGGGTGCCTGCATCTGAAGTTGAAAGTAAGACCTTCGTAAACCAGGAAAACA... | 621, 321 | [
"641, 321",
"631, 321",
"671, 321"
] | RE-seq-lenfrags | hf-carbon/natural-plasmids |
c7b0e6ad-e6db-4d72-8662-d3e092a834ed | What are the lengths of fragments produced when the sequence GGAAACAGATGTCTCTGATTTTTCATGTAAGGCCTTAGGCTTGAGCGCATAGGGATAGCAACCATGATTTCTGGAGATATCTCTAGTATAGTTACTCCATGACCTCTTTGGATGTCCGTTTGAAATTCATCTATTTCCCCATAATCCTGAAAATAAGATGAATTCATAAAAAAGAAATATAAACTACCTTTAGCTAACATTTAGTTTTCCCCTTTTTATATAAAAAAAAGAGACTTTCTTTTTGAGAAGTCGCGCTCTC... | 762, 204 | [
"762, 184",
"762, 254",
"762, 194"
] | RE-seq-lenfrags | hf-carbon/natural-plasmids |
0a549d72-fc92-4da1-84d0-6cacc9d729aa | What are the lengths of fragments produced when the sequence GTATGTTTCGCCTTCATTAAGAGACGGAAAGATCTTGGGATAATTAGGTGCATACAGGTTGTTTCCCAGATTCACCCAAGACAATTCCACCGCATCAGAAACAGGGCCACCGCGAAGAGTCATACGGCTTAAGGATGGTTTAGTTAGAGCATCGGTGAGCTGTATACGGACGTTCTCCAGCCCATATACTGTTACGTTTTTGCTGATCGGTTTTCCTTCGTAGCTAATACTTACAGATGGTGCTGTATTATCAACGACA... | 31, 905, 127 | [
"31, 955, 127",
"31, 905, 77",
"31, 905, 117"
] | RE-seq-lenfrags | hf-carbon/natural-plasmids |
c2759046-0b97-4ffc-b7fa-1227a6aa064a | What are the lengths of fragments produced when the sequence CCGCTATCGGGAATAACCTTAACCAGACAGCGAGGAAGGTGAACAGCGGGCAGTGGTCTTCCGGTGACCGGGTTCAGGTGGTGGCCGCACTGATAGCCATCGGGGATGAGCTGCGCCGGCTGCGTCTGGCGGTCAGGGAACAGGGGGCGCGGGATGATAGTTAAGTTTCATGCCAGGGGAAAAGGTGGTGGCAGTGGTCCGGTTGATTACCTGCTGGGAAGGGAGCGTAACCGGGAAGGGGCAACGGTGCTTCAGGGGA... | 407, 764 | [
"427, 764",
"407, 814",
"1171"
] | RE-seq-lenfrags | hf-carbon/natural-plasmids |
c8705607-7b3b-4d27-954e-b405f86b2379 | What is the amino acid encoded at position 10 of the longest open reading frame in the following DNA sequence? CTTCTCAACGGATTTATACCATGGCACTTTAAAGCCAGCATCACTGACAATGAGCGGTGTGGTGTTACTCGGTAGAATGCTCGCAAGGTCGGCTAGAAATTGGTCATGAGCTTTCTTTGAACATTGCTCTGAAAGCGGGAACGCTTTCTCATAAAGAGTAACAGAACGACCGTGTAGTGCGACTGAAGCTCGCAATACCATAAGTCGTT... | Ser | [
"Ile",
"Asn",
"Glu"
] | ORF-seq-AAid | hf-carbon/natural-plasmids |
91444438-188b-41bd-bc17-0480ec26fcb5 | What is the amino acid encoded at position 45 of the longest open reading frame in the following DNA sequence? AGGTATTTAGCTACTCATTTACAGATACCAATAAGGCTGTTCGGAATATCAAACCTGCAACACAAACATATCTTAATCCCGCTGGTGTTTTGACTCTGAACTTGATATCGGGTCTTGATCGGTACGAGCGAGTGACGGTCACACGAGACAGCGATAAAAAGGTTATGTATTCCTCCGTCTCGACCAAAACGAGCGTTGCAGATCGTATC... | Leu | [
"Glu",
"Cys",
"Gln"
] | ORF-seq-AAid | hf-carbon/natural-plasmids |
5fcb2ea7-54b4-4dfb-bcd8-550293f50ddc | What is the amino acid encoded at position 38 of the longest open reading frame in the following DNA sequence? AATTGTGTTTTTCTTCAAAACATAATCCTTAAAAAAAATTAATCATTAGTTATTATTTGGCAAGCTCAATATTTTTTATTTCTAATATAAATGTATTTCAATTTCTTTAATTTTCAATGGTTGTTTTATTTATTTAAAATAAAATTTAATAAATAAAACGTTTAACATATTCTTAAACCCCAAAAATTTTCCGTTTGATTTTTAAATTT... | Val | [
"Ile",
"Cys",
"Phe"
] | ORF-seq-AAid | hf-carbon/natural-plasmids |
b6ae143f-c0a9-4bf4-99fd-815811c72d34 | What is the amino acid encoded at position 211 of the longest open reading frame in the following DNA sequence? CCTCCGGGCGTCTCAGGTTTCCCGAACAGTTTAACCGCAGGTCCTCTCCTCATGCCAGTTAGCTTTCAGATGTGTCTATACCATCTGAAATGTAAGTGTGATGAATGTCTTAAATAATAAAATTTGTTGCCATGAGAAATTTTCGGGAAAAGACGCGATCTGCTTACAGGTGGCTCCGGGCGCTTTTTTGTGCCTGAAGATGAGAACT... | Arg | [
"Asn",
"Asp",
"Phe"
] | ORF-seq-AAid | hf-carbon/natural-plasmids |
6be092c1-8bec-4e5a-ab33-9ee6da4a8c48 | What is the amino acid encoded at position 336 of the longest open reading frame in the following DNA sequence? CGTTCAGCACGTACTTCGACAGCAGATATTTAATCTCATCGAGCATGATGCTCGCGTGCGGCCACCTCCGGAACTCATCCCGCGCAATGATGATTTGCGCGCAGCGGGCAAACAGCATCTTCTGCACCCGGATCACCGCCTCATCGTCCATCGAGCCGATGACGTACAGGCAGCCGCCGCCGTTGATTATCCCCGCCACATCGATACC... | Lys | [
"Asp",
"Thr",
"Ile"
] | ORF-seq-AAid | hf-carbon/natural-plasmids |
9d7029f8-69dc-4219-b526-6b7d25371a04 | What is the amino acid sequence of the longest open reading frame in the following DNA sequence? GGGGAAAGAGTGGGTACATCTGAAGGAGTGACACAGAGTGACAGAGCTGGAAACACATTTGCTGAACGCCTTAGAGCAGCTGCAACAGGACTATATGCAGCGGCTGAGCGAATGGGAGAGCGCCTTCGTGGAATTGCAGAAGATGTTTTCGCTTACGCAACGGGACAACGCGATGCTGAACGAGCGGGTCATGCAGTTGAGTCAGCAGGTGCAGCACTTGAGC... | MGERLRGIAEDVFAYATGQRDAERAGHAVESAGAALERADRTLEPVIQRELEIREERLIQEREHVLSLERERQPEIQERTLDGPSLGW | [
"MGERLVGIAEDVFAYATGQRDAERAGHAVESAGAALERADRTLEPVIQRELEIREERLIQEREHVLSLERERQPEIQERTLDGPSLGW",
"WESAFVELQKMFSLTQRDNAMLNERVMQLSQQVQHLSEQTERLSQLYSENWR",
"GRAPSWNCRRCFRLRNGTTRC"
] | ORF-seq-AAseq | hf-carbon/natural-plasmids |
3e649bb2-2de8-4dbd-8f54-a7c62f5eab12 | What is the amino acid sequence of the longest open reading frame in the following DNA sequence? CGCAACTCATGATAAAGCGCTGTTCCTGATGATATTTAAGATTAAAAGTGCCTGGCCAGTTCTCCATAAGCAACACCATCAGTTTTTGGTGATCTTTTTTCGCATTAACTGGCAGTGTTAAAAAAAGTTGCCCCTCAGGCTTATCGAAATCCCTTAGCCACTCATCCAGGACGGTTAAAAGCGTTTCGGGATGGTCGACCGCAGCTGAAAATAACTCGCGGGC... | MIDALQQVAAYLTDNQTMAWKWMEKIQIYARELFSAAVDHPETLLTVLDEWLRDFDKPEGQLFLTLPVNAKKDHQKLMVLLMENWPGTFNLKYHQEQRFIMSC | [
"MIDALQQVAAYLTDNQTMAWKWMEKIQIYARELFSAAVDHPPTLLTVLDEWLRDFDKPEGQLFLTLPVNAKKDHQKLMVLLMENWPGTFNLKYHQEQRFIMSC",
"DRRVTAGRRLSY",
"ATGATAGACGCGTTACAGCAGGTCGCCGCTTATCTTACTGATAATCAGACAATGGCCTGGAAGTGGATGGAAAAAATACAGATTTATGCCCGCGAGTTATTTTCAGCTGCGGTCGACCATCCCGAAACGCTTTTAACCGTCCTGGATGAGTGGCTAAGGGATTTCGATAAGCCTGAGGGGCAACTTTT... | ORF-seq-AAseq | hf-carbon/natural-plasmids |
5accb6cf-bdda-48ee-b0cf-caa6d3f07694 | What is the amino acid sequence of the longest open reading frame in the following DNA sequence? ATTATTTCGCCATGAATATCAGCAATTGCATATTGCAACGGTAAAAATAAAACTAGGAAAATAATATTCCAACGCTTCAGCATTAATTTTCGCCTTTTTGTTCATCTGCTTCCCAAATAACACCGAACCCGGCTTTATAACAAAGTAACGCCCATGCCGCGTAAGGTATCCCGCCTTCTTTACACCAACGCCTAAATGTCCGGCTTCCCTTTCCTCTCCCTGT... | MYFDASTPVNLFPDRSSTRLNTALISSPVGGVQPSLKGRKVSVLITLFKVSLLKAPPKRGNRLRRPESLRSARVMLPSPL | [
"MYFDASTPVNLFPDRSSTRLNTALISSPVGGVQPSLKGRKVSVLILLFKVSLLKAPPKRGNRLRRPESLRSARVMLPSPL",
"CILMRQHQ",
"VF"
] | ORF-seq-AAseq | hf-carbon/natural-plasmids |
bd51b9a1-90ec-40a6-874b-fd89e062385a | What is the amino acid sequence of the longest open reading frame in the following DNA sequence? CATTGAGAAGACAGGCTCAATATCAAGCGTTTTTAGTCCAGCCTTATCATTCTTAATCATAAACCATAAAGCGACAGCATAAGATTTAAAAACACCACCCGCCGTCTTATTAAGATAGCTACCAGCATCCGCACCATCTGTCTTATAGGGGTAAATAATCAACGAAAGATTTTCAAGCTGATTAAAACCTTCACTCGTTCCCATGCTGACATAATACAAAGGG... | MGTSEGFNQLENLSLIIYPYKTDGADAGSYLNKTAGGVFKSYAVALWFMIKNDKAGLKTLDIEPVFSM | [
"MGTSEGFNQLENLSLIIYPYKTDDADAGSYLNKTAGGVFKSYAVALWFMIKNDKAGLKTLDIEPVFSM",
"WERVKVLISLKIFR",
"GNE"
] | ORF-seq-AAseq | hf-carbon/natural-plasmids |
607201d4-512c-41bf-b0e5-25fd565fffc0 | What is the amino acid sequence of the longest open reading frame in the following DNA sequence? CTTGATCAGCTCGGAGGCGTTTTCGTCCGGCAGCAGGGCAACCTTTAGCACATCCGGATCGGCATCGGCCGCTAGGGCGGACAAACTTGAAACAGCGGACAGCAAGCAAGTCAATAAGAGCGCGGATAAGCGTTTCATCGGGACATCTCCAGTGAAGGTTCGAGCATGACAGGTGGTTCAGCCGGAGTATTCGCTGGCTGAGTCGTAGAGCGGCCTGCATAGA... | MPAASPIASSGWPILRSFSMPRPRNSPMRSLSASMQAALRLSQRILRLNHLSCSNLHWRCPDETLIRALIDLLAVRCFKFVRPSGRCRSGCAKGCPAAGRKRLRADQ | [
"MPAASPIASSGWPILRSFSHPRPRNSPMRSLSASMQAALRLSQRILRLNHLSCSNLHWRCPDETLIRALIDLLAVRCFKFVRPSGRCRSGCAKGCPAAGRKRLRADQ",
"CPPLRRSRRRAGRFSDRFRCRALGTHRCAA",
"ARRFADRVVGLADSQIVFDAAPSELTDAQLERIYAGRSTTQPANTPAEPPVMLEPSLEMSR"
] | ORF-seq-AAseq | hf-carbon/natural-plasmids |
a1ee17f2-94b2-44b5-b636-40d49bfc0289 | How many open reading frames encoding proteins of more than 10 amino acids are in the following DNA sequence? GTGTACAATCATTATCACCGTATTTTCTGCATCAACAAGCCGCTGCAACTGCACAAGGAGGCGGTCTGCGTCTGAAGCATGCAGGCCGGTTGTCGTTTCATCTAGGATATACAACGTGTGGCCACGTTGGCTACGTTGTAGTTCGGTTGCCAGCATGATCCTTTGCGCCTCCCCTCCGGATAACTCGGTTGCTGGTTGTCCCAGACGCAG... | 35 | [
"34",
"36",
"70"
] | ORF-seq-numlen | hf-carbon/natural-plasmids |
cfb96c45-e2dd-476c-8655-bddfcd1e4faf | How many open reading frames encoding proteins of more than 30 amino acids are in the following DNA sequence? ATCCTTCATCACAACACACAAATCAGCTGAAATACCTACCCACATGCTCCCAATATTGTTACTTAGTCTATCATTTATTAATGAATCGCATTTAACATCAGAGTCAAATTTAGCCAAAAGAGGATTGCTGTTTTTTAAATTATTTTCGATTGATGATCTGAGAAAACCCAAGTACACATCGAAATCTTTTTCTGCTGTAAACTTACAATC... | 9 | [
"7",
"12",
"11"
] | ORF-seq-numlen | hf-carbon/natural-plasmids |
ebdfab10-f4a6-4d6b-a657-5e4c5cf2c614 | How many open reading frames encoding proteins of more than 50 amino acids are in the following DNA sequence? CTTTGCACTCAGGGCATTCGCACTTATCTCGTCGTACATGGTTTTCTTGAATTACACGAGGTATAACTTCAGCTTTACAAAAAGGACATAACCCTTTGTGTTTTGATGTCATTTTGACCTACTTAATTGCACTGCAACTAATTAATTTTGAACGACATTTAGGGCAGTAGTTCGGTGTTCCAAACCCACTCCTACTAGTCCATTCATGCC... | 4 | [
"2",
"7",
"6"
] | ORF-seq-numlen | hf-carbon/natural-plasmids |
039b14f5-967d-4ac3-bdbe-ec3bd115807a | How many open reading frames encoding proteins of more than 50 amino acids are in the following DNA sequence? AAAGCAGAATTCATAGCTCTGATCCTGGGCATTGAAGTCGTAAAGGTCGGGTAGTGAGAAGCTAGCTAACTTAGCTCTTGAGCTAAGTTAGCTTTTGAGCTAACGTGTGCACATACGGACCAGAGATTACATTCATGTTCACAGTCATCTTTCATGATGAGGCTGAAAAAGAGTTTACGGCTCTGCCTGCTGCCATTCGTGCAAAAATGG... | 11 | [
"12",
"9",
"22"
] | ORF-seq-numlen | hf-carbon/natural-plasmids |
d5340d7b-9cc9-4ff9-abbb-82d278482ba2 | How many open reading frames encoding proteins of more than 10 amino acids are in the following DNA sequence? CTTCAAAATATCGAGATGTCATGGATGCCTGGTCCGATTATTCTAGATGCTGTTGCTCGTCAATTTTCGCTGGATACCGCGTGTAATAATGTGGAATTGCTTCAATATCTTTGATATAACGCCATTTCAATTGACCTTTACCAAAGATCACAAACTGTTTCTAAGGGAGAATGGGGGCTTCAAATGAAAAAGACAGCGAGTTTGATATTA... | 18 | [
"15",
"16",
"9"
] | ORF-seq-numlen | hf-carbon/natural-plasmids |
669701c3-c777-4c14-b705-81859ddd4045 | Which of the following mRNA sequences contains an open reading frame that is most likely to have the highest translation efficiency in a human cell? | GACGGCACAGUUCUGAGGACGCGCGGAGCCACCAUGCAACCAGGUUUCAGGACGGAGCACGGGUCAAUCUCUCCAAUUCGAUUAGAAACCGGGUAUCCACUUACCGCCACCUACAAAGAU | [
"GCGGACGAACCAGAGUUGUGAGGCAGCGCCGCUAUGCAACCAGGUUUCAGGACGGAGCACGGGUCAAUCUCUCCAAUUCGAUUAGAAACCGGGUAUCCACUUACCGCCACCUACAAAGAU",
"UCAAUCUAGGAUGACCAAAUUCAGAGAGCCACCAUGCAACCAGGUUUCAGGACGGAGCACGGGUCAAUCUCUCCAAUUCGAUUAGAAACCGGGUAUCCACUUACCGCCACCUACAAAGAU",
"CGUCAUACCAAUGAGUCAUCAUCAAGGGUCCCCAUGCAACCAGGUUUCAGGACGGAGCACGGG... | ORF-transeff | procedural |
5468db2d-12ba-4466-95f3-375adfd6d6b4 | Which of the following mRNA sequences contains an open reading frame that is most likely to have the highest translation efficiency in a human cell? | UCUAGAUUCUGUGGCCGCUUCGCGUUCCCUUAGGGGGAUUACGGAAGGAGCCACCAUGCUCGCGACGUUGGACGAUGACCUUAGACGUAAUACAUUACCGAAAUACGUAAGUAACGAC | [
"GGCCUACGUCGAGGUGGACCAACAAUCAUAUCAAUAUCCUCAGUUUCAGGCCGCUAUGCUCGCGACGUUGGACGAUGACCUUAGACGUAAUACAUUACCGAAAUACGUAAGUAACGAC",
"AUACGUAUGCCUUUCAGCUAACGCACACGAUUCCUCCUCUGUACACGUUGCCACCAUGCUCGCGACGUUGGACGAUGACCUUAGACGUAAUACAUUACCGAAAUACGUAAGUAACGAC",
"GCUUGAAUGGACGCGGCAGUGAAUUCUAGCUGUUUAUAUUUUGCUAUAAGUCCCCAUGCUCGCGACG... | ORF-transeff | procedural |
e6a6d11b-20fe-47b2-af9c-552714bf883f | Which of the following mRNA sequences contains an open reading frame that is most likely to have the highest translation efficiency in a human cell? | CCCCGAAUCGGCGGCAACCGUGAGCGAUUGUGCCACCAUGCCGCCAUAUGCUUGGCCUUCAUUUCCCGCCGUUCUGGCUCGGCUCGUAUCUUGCGUAGUCUCCCAUUGCCAGAAA | [
"GGCCUUAAUAAGACGUCCAAAAGACUUUUAAGCCGCUAUGCCGCCAUAUGCUUGGCCUUCAUUUCCCGCCGUUCUGGCUCGGCUCGUAUCUUGCGUAGUCUCCCAUUGCCAGAAA",
"AUCCAUUUAUAAUGUCGUGAGCUAACCUACCGCCACCAUGCCGCCAUAUGCUUGGCCUUCAUUUCCCGCCGUUCUGGCUCGGCUCGUAUCUUGCGUAGUCUCCCAUUGCCAGAAA",
"CGUUAACAGAAAUGGUUGGAAUUAGUUAAUUCUUUUCAUGCCGCCAUAUGCUUGGCCUUCAUUUCCCGCCGUU... | ORF-transeff | procedural |
36abbd2a-2328-4b61-b958-99b7a4c069d8 | Which of the following mRNA sequences contains an open reading frame that is most likely to have the highest translation efficiency in a human cell? | ACGUGGCUCCUAGUAGGAUAUACGUAGAUUAGGGAACGUCUUGACGCCACCAUGUAUUACCGGUCCGUACCAUUGGCUCGCAAAAGUAUCAGAAGCACGGCUGAUAAAACGCCAAAGCUCGCACCUGCA | [
"AAGACCACUUAUUACGUCUCGAACCCGGUCUCGUGGGGCAGUACCGCCGCUAUGUAUUACCGGUCCGUACCAUUGGCUCGCAAAAGUAUCAGAAGCACGGCUGAUAAAACGCCAAAGCUCGCACCUGCA",
"UGGUGUUACGCCCCUUUUGGACACACCAAAUGGGACAUCUUCAGUGCCACCAUGUAUUACCGGUCCGUACCAUUGGCUCGCAAAAGUAUCAGAAGCACGGCUGAUAAAACGCCAAAGCUCGCACCUGCA",
"CUGAGUGCUUAUUGCCAGAAAUCUUACAGAUGAUCAGUAGCAGCU... | ORF-transeff | procedural |
43d4b192-91e5-4951-ac32-af2375514115 | Which of the following mRNA sequences contains an open reading frame that is most likely to have the highest translation efficiency in a human cell? | GUUUCCUAAGGAUUUCCUGAGAACGCCACCAUGAACCCCAAUACGAAAACUUUGGCCUACACCACGCUUGACCGGAGAUUGUUACACUUAAGGUACGGCGUGUCGAGUAGGAUU | [
"CGCGUAUCUGUGCGUCCAAUCAAGGCCGCUAUGAACCCCAAUACGAAAACUUUGGCCUACACCACGCUUGACCGGAGAUUGUUACACUUAAGGUACGGCGUGUCGAGUAGGAUU",
"AAUCGAUCAUGGGCGUUAAGUAGGGCCACCAUGAACCCCAAUACGAAAACUUUGGCCUACACCACGCUUGACCGGAGAUUGUUACACUUAAGGUACGGCGUGUCGAGUAGGAUU",
"GAAUAACGAUGGUGUUAACGACAUCUUUUCAUGAACCCCAAUACGAAAACUUUGGCCUACACCACGCUUGACCGG... | ORF-transeff | procedural |
5a8cb251-d0cc-4c33-aa8b-8341ceaf740f | I want to clone a gene with the following sequence into the plasmid pUC19 using restriction-ligation cloning. Which of the following primer pairs should I use to do the cloning with the enzymes EcoRV and HindIII? CCGCCACAGGAGACTGCCGGCAGGTGGCTCAGGGACTGCTGGACGGCACCGGGGATAAGTCGCAATGAGTTTACCTGCAGGCTATTACCGGATTGACCCGGACATCC... | GGGGGATATCCCGCCACAGGAGACTGCCGG, GGGGAAGCTTTTTCACCGGTCGCCCATTCC | [
"GGGGGATATCTCATCACTGGTATCACCGGT, GGGGAAGCTTTTTCACCGGTCGCCCATTCC",
"GGGGGATATCGGCATTGATGGCGCTGACAA, GGGGAAGCTTTTTCACCGGTCGCCCATTCC",
"GGGGGATATCCCGCCACAGGAGACT, GGGGAAGCTTTTTCACCGGTCGCCCATTCC"
] | PCR-seq-enzprimers | hf-carbon/natural-plasmids |
5386e312-030a-4879-b39b-22993b7c8903 | I want to clone a gene with the following sequence into the plasmid pUC19 using restriction-ligation cloning. Which of the following primer pairs should I use to do the cloning with the enzymes NdeI and XhoI? AAAGAGGGGGAGAAATCCCCCGTAATCCTCCCATTTTTTACTGATAAACATCAAATATATGAGGTGTATTATGTGGAAACGTGGCGAAAACAAAGTGATTCTGATGGGGCG... | GGGGCATATGAAAGAGGGGGAGAAATCCCC, GGGGCTCGAGACTTCACGTTTATTATACGT | [
"GGGGCTCGAGACTTCACGTTTATTATACGT, GGGGCATATGAAAGAGGGGGAGAAATCCCC",
"GGGGCATATGATAAGGAAATTGTTATCGAT, GGGGCTCGAGACTTCACGTTTATTATACGT",
"GGGGATCGATAAAGAGGGGGAGAAATCCCC, GGGGGGATCCACTTCACGTTTATTATACGT"
] | PCR-seq-enzprimers | hf-carbon/natural-plasmids |
5057f779-c12e-4473-ace7-3af8a2403c64 | I want to clone a gene with the following sequence into the plasmid pUC19 using restriction-ligation cloning. Which of the following primer pairs should I use to do the cloning with the enzymes XhoI and EcoRI? TCAGGCGGCTGCTGCGAAATGGTGGTTGAGCATGCCCATGGCCTCCGTCAGCGCCGAGGGCCCAATGCCAAAAGCTCTCTCCACAAGGCGCACCTCGCCCCTGATGCCGG... | GGGGCTCGAGTCAGGCGGCTGCTGCGAAAT, GGGGGAATTCTTGAGGAAATGCTGGCGGAA | [
"GGGGCTCGAGCTGTCCTTTGCGCAGGGCTC, GGGGGAATTCTTGAGGAAATGCTGGCGGAA",
"GGGGCTCGAGTCAGGCGGCTGCTGC, GGGGGAATTCTTGAGGAAATGCTGGCGGAA",
"GGGGCCATGGTCAGGCGGCTGCTGCGAAAT, GGGGCATATGTTGAGGAAATGCTGGCGGAA"
] | PCR-seq-enzprimers | hf-carbon/natural-plasmids |
ed4883df-f3cc-47d4-85d4-3255ac927d20 | I want to clone a gene with the following sequence into the plasmid pUC19 using restriction-ligation cloning. Which of the following primer pairs should I use to do the cloning with the enzymes ClaI and EcoRI? ATGTCCTGCTATGTGCTAACTTTTCCAGTTTAATGGCCTCTCGTCGAGTTGTGTGGCAACAGTGTTGCCACCGGCGGAAATCCGCCGGTTTGAATGCTTTTTTGTTCAGC... | GGGGATCGATATGTCCTGCTATGTGCTAAC, GGGGGAATTCCCGGTGCTGGGCCAGGCGCC | [
"GGGGATCGATATGTCCTGCTATGTG, GGGGGAATTCCCGGTGCTGGGCCAGGCGCC",
"GGGGAGATCTATGTCCTGCTATGTGCTAAC, GGGGCTCGAGCCGGTGCTGGGCCAGGCGCC",
"GGGGATCGATGCGCTGCCGCTAAATGGCAC, GGGGGAATTCCCGGTGCTGGGCCAGGCGCC"
] | PCR-seq-enzprimers | hf-carbon/natural-plasmids |
dfb336d7-3b4b-437e-bd1c-210c568b4617 | I want to clone a gene with the following sequence into the plasmid pUC19 using restriction-ligation cloning. Which of the following primer pairs should I use to do the cloning with the enzymes EcoRV and HindIII? AATCTGTCACCCTGCTCGAAGCTGAATTGATAATTTGCAAGACAGCTAACGTCTCCAGCTATCGCCAAAGCTGCCAAGTGCCGCAACGGCATAGCACCCTTCGAATT... | GGGGGATATCAATCTGTCACCCTGCTCGAA, GGGGAAGCTTGACAGATTTATTTTCCCTAC | [
"GGGGAAGCTTGACAGATTTATTTTCCCTAC, GGGGGATATCAATCTGTCACCCTGCTCGAA",
"GGGGGATATCAATCTGTCACCCTGC, GGGGAAGCTTGACAGATTTATTTTCCCTAC",
"GGGGGATATCGTCTTTAAATTCAACAATAT, GGGGAAGCTTGACAGATTTATTTTCCCTAC"
] | PCR-seq-enzprimers | hf-carbon/natural-plasmids |
464bbb91-b397-4e32-990f-15faca72518c | Which pair of primers will amplify the following target sequence from the given template?
Target: CATACCTCAGTCAATAATTATCACTAGTACTCGTAGCCGTCGTGTAACCGAGCGTAGCGAGCTAACTGGCGAGGACGCGCGCTAACTGTTCACACTCAGTATCCCTAGCACCAAAATAACTATCTGATGGTCAAGGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATG
Template: GTTAAGTGTTTCCATGAGTCTC... | CATACCTCAGTCAATAATTA, CATCGGGCATTATCTGAACA | [
"CTGCGTATATCGCTTGCTGA, AATCATTGATATGGCCATGA",
"TGGCGAGGACGCGCGCTAAC, CGGCATAACCTGAATCTGAG",
"ACCGAGCGTAGCGAGCTAAC, TGCGCACGTATTCGGTGAAC"
] | PCR-seq-primers | hf-carbon/natural-plasmids |
4647505b-1e49-4359-9549-00320ab96dbe | Which pair of primers will amplify the following target sequence from the given template?
Target: TAATGAGCCTCTCCTCTACCCCCGCAGTACGTAGAGCTCGCCACTTATAATGGTCCCCTTCAAGCCAGATTTGCCCAAGATTTTCAAAACGGCGATCCTGCGCAATCTCTTTCGGGCTCAGGTGGCAATGGAAGTCGTAAATGGGCATTACTGCCGCATACCTGTGGTAGAGCATGCGGGCAATCTCATTTTTGAGTAAAAAGTCTTCCGTCATAAATGCGG... | TAATGAGCCTCTCCTCTACC, CATAGCGCGCAAGAACGTGT | [
"GGAAGTCGTAAATGGGCATT, ATCATAGCGCGCAAGAACGT",
"CTATGATACTGCTGATGGAT, GCGTTGCTGGATGGATGCGC",
"CCGTAGTTTCATCATTTCAA, TGGGTGATAGAAGATAACTT"
] | PCR-seq-primers | hf-carbon/natural-plasmids |
a2e0eaca-e220-4c0c-9677-0022ead792a2 | Which pair of primers will amplify the following target sequence from the given template?
Target: CCGGATCGAGCGCACGCTGTTCATCCTCGACTGGCTGCAAAGTGTTGAACTGCGCCGCCGCGTGCATGCCGGCCTGAACAAAGGTGAGGCGCGCAACTCGCTGGCCAGGGCGGTGTTCTTCAACCGCCTTGGGGAAATCAGGGATCGGAGCTTCGAGCAGCAGCGCTACCGGGCCAGCGGCCTCAACCTGGTGACGGCGGCTATCGTGCTGTGGAACACGGT... | CCGGATCGAGCGCACGCTGT, GGCATCCGTAAGGGCCGAAA | [
"CTGGAAGACGGGAAGTTTCG, CTGACTGCGGCTACACTAGA",
"GTGGTTCGTTTGCCGGAATC, TACCTTCGGAAAAAAGAGTT",
"GTGTTCTTCAACCGCCTTGG, AGAATTCGGAAAAAATCGTA"
] | PCR-seq-primers | hf-carbon/natural-plasmids |
b7b2ca73-4175-432d-998f-ae6dfd3ea4b2 | Which pair of primers will amplify the following target sequence from the given template?
Target: CTGAGATTATTACCGGTTTACTGCTTAAACCTGAACTCCTTGGTGAGCTGGACTCACCAGAAAAGCATCGGATGTTTATGGCAGATTTAGGCCGGGTGGTGGCAGAACATTGTGGAGGTCTGGTAAACAGCGTCGTCTTGCCAGGAGCTGAAGTTACAGTGCCGGATGGGTTACCGCTTAACGGCCAGCCAGTACGTTATCTCGGAATCAAAGAGAGCATCC... | CTGAGATTATTACCGGTTTA, AAGGAAGCATCAGGCTCTAC | [
"TCTCGCTGCCGTGCTGAAGG, CCTGCTCTTTTCGGTTCCAT",
"ACCTTCGCTCGCTAAAAACG, AGCTGCATCATTTCATGAGT",
"TTTCCTTTTATGCCCGGTGC, TCAGTTCACGAGGAGATACT"
] | PCR-seq-primers | hf-carbon/natural-plasmids |
1dab54f6-7ee6-4bdd-b069-3bff345a3dfd | Which pair of primers will amplify the following target sequence from the given template?
Target: GTTCTGCCAATTGCGGATGTAACGCGAATGACGACCCGTCCTGCAGCAGTACCTGCTCAAAGCCTGCCAGTCCGTGGGCGTCCGGTAGACACTCCTTGAGGCGTAAGGCGAT
Template: GCCGTCCTGTCGGTAAGCTGCCTGTACTTTGGGATTGAGATTTTGACTCCCTCTGACCAGATAGCTTCCTTTGGCTTTGGTCACATCAGCAAAGTACTC... | GTTCTGCCAATTGCGGATGT, ATCGCCTTACGCCTCAAGGA | [
"ACCGGCATCCGCCAATAACA, CTTGTTCATGCGCGCACTGG",
"CTGATGTAACCGGCATCCGC, TGCAGGACGGGTCGTCATTC",
"CTGGTCCAGCAAGGACATGG, CAGCCTGCGAGACTACTCCC"
] | PCR-seq-primers | hf-carbon/natural-plasmids |
97fc6cf0-d067-480f-8455-0fd212798dd9 | Which pair of primers will generate a PCR amplicon of 264 base pairs from the following template? CTATATTCTTTAAGCGACTTGGGGTTATCCGAGATAAAACCATCCATTCTTTTTTTACCACCTTTATATGTATCTTCCTTACGCATCTCCCTTTTATTGACTCTTTTACTCCCATCTTTCAGTGAGTAAATGAAAGATGATCCAGCCCGAAGAACTTGGTCAACATAAATAGGAGTTGCAATATTTGTGTAAAAATAATTACACCCATAAGCCATATTTTTT... | TCCTTCAATAACCAACAGTA, AAAGCTTTACGAATATTTAT | [
"GAATATAAAAAATTCATTAC, TAAAGGAGCAAGACATGGCT",
"CCACAAACTATTAATACCTG, TTCGTACAAGTTAGATTATA",
"CGCATCTCCCTTTTATTGAC, TATCAGACATTACAATAAAT"
] | PCR-len-primers | hf-carbon/natural-plasmids |
600a42cc-80a6-44a9-86c1-f4d0a7eb457e | Which pair of primers will generate a PCR amplicon of 211 base pairs from the following template? TCTTACGCTCAGCGCAAGAAGAAATATCCACCGTGGGAAAAACTCCAGGTAGAGGTACACACGCGGATAGCCAATTCAGAGTAATAAACTGTGATAATCAACCCTCATCAATGATGACGAACTAACCCCCGATATCAGGTCACATGACGAAGGGAAAGAGAAGGAAATCAACTGTGACAAACTGCCCTCAAATTTGGCTTCCTTAAAAATTACAGTTCAAAA... | TGTCGTCATGGAAGTGATAT, CGTCTCTCTGAAAATCGACT | [
"CGATATGAGTCGTCTGGCGG, GTGAAACAAAAGAAATCACC",
"AAGGAAACAGCAAAACTGTG, AAAGAAAGGCCGCCAGACGA",
"TGTGACAGATAACCCTCAGA, GAAATCACCAATCCGTATGC"
] | PCR-len-primers | hf-carbon/natural-plasmids |
9fec2f84-3a47-4aa7-b848-04ace14b8584 | Which pair of primers will generate a PCR amplicon of 573 base pairs from the following template? GGGATTTTATCGAATAGCTTGCCGGTTCGTATTTCAACGCGGCGGTGTTCCGCCGCGGTTAGTAAACGCATAAATTCTGTGGCAGGTAGAACATCACGTTTTGAGTCTACATACGTATCAAGCGAATCTTCATTCATGAAACGTCTGACAGTATGCAGCCAGTCTTCAGCTGATTTCATATTTTTTGAGCTCATCGTCGCTCATCTCGGCAAACGCTGCAGG... | GCGGCGATTTTAGCGCTGAA, TGTTGGCCTTGCGCCTGCTG | [
"TAGTAAACGCATAAATTCTG, AGTTTGATCCATAATATTTT",
"TTCCCTGTGCAATGTCGGAC, AAGTCCATCACCTCTTCCGC",
"TATTTCAACGCGGCGGTGTT, ACTGAGTTTTGATCCGAGTC"
] | PCR-len-primers | hf-carbon/natural-plasmids |
77a8fb9d-6b0f-4515-ac07-9eb8949be495 | Which pair of primers will generate a PCR amplicon of 374 base pairs from the following template? TGGCCAGAGTGTCTATTAGTGAGGCTGCCCGACTGACGGGTAAGAGTAGAACAACACTGCACAGGTTAATTAAAGCAGGTGACCTGTCCACCTGTAGCGGTGAACGCAATGCAAAAATGGTAGATACTTCAGAGCTTTTACGTGTCTTTGGTCCCTTTGAGCAACCGAAGGGTGAACACCATTCTGGACTGGTGTCTGAACAGCGTGATACAGCCTCTGCTG... | GAAACAGGAGATTGAACACC, TCTATGACGAGTCGTCATAG | [
"TTTTGTCCAAGGATTCGCAC, CGGGTCTAGAGTCGGGTCGT",
"GTCTATTAGTGAGGCTGCCC, AGAAGGAGCATGGCCTGTTT",
"TCCGGCCATCCCGGGGAGTT, TATTGCGTGGCCGTGAAGCG"
] | PCR-len-primers | hf-carbon/natural-plasmids |
56e02804-30c9-4a4c-8c77-3bcce6e07855 | Which pair of primers will generate a PCR amplicon of 331 base pairs from the following template? TTGGCCCCCGAAGGGGCGGCCCTTTCCCTGGCGCCCTGGGAAAAAGCGCTCGCAGCCTCGTTTGTACATCTGCGGTTTATGGGCGACCGGCCAACGGCTAAATCCATTCTCGACGATCTCAACCGTTCCTGCCTGCGGACTAAAGACGGTTTCCCTGATTATTCGCTGGCCGCCGGGTTCTGGACCGTCGCCAGCCAGTGTGAAGCGTTCCGAGAATTTGCA... | GCACAATACGTTTTCTGGTG, GTTATCAGCCAGTTTTTTAG | [
"GTGGACCGCACGTTATGGTA, CGGCTGAGGTTTAGCCGGCG",
"GCTGTCTAACTTTATCTTCT, GGGTGTGTTTATGCCCGGTT",
"TGCACTCCTTCCCCCTGTCA, GGTGACGGCATCTTTCAGTG"
] | PCR-len-primers | hf-carbon/natural-plasmids |
2d87dfcf-0697-4a8c-94ff-064b72a88957 | What is the expected length of the PCR amplicon produced using the primers GTCCGGGGGTATTCAGTGTG and GCTGTTTTACCTGTGCCGGG on the template GTAAAGGTGGCCCTTCATCAGGTGGTGGTACGGATCCAAACAGCGGGCCGGGCTGGGGTACGACGCATACGCCGAATGGAGATATTCATAACTATAATCCGGGGGAGTTTGGTAACGGCGGGAGTAAACCCGGTGGTAATGGTGGTAACAGCGGCAATCATAGCGGTAGCTCTGGTGGCGGAC... | 246 | [
"248",
"249",
"243"
] | PCR-primers-len | hf-carbon/natural-plasmids |
83e578f1-3af7-4d9e-b351-60954f806adb | What is the expected length of the PCR amplicon produced using the primers ACCAAGCACCAGGCATTCAT and ATCCACCACGCGCCGCCCAT on the template GCCGGTGGGAGCCGATGACCTGGCCGAACCACTGCCGTCCGGATTCGTGCTGGTGGATGCCGTCCTGACCAAGCACCAGGCATTCATCGTCAAGAAGTGGGCCGAAGCTGCGCGCCTGAAAGTCAAGGCGGCCAGGGGGGCCGCCAAGGCCGTGCCGGCCCGGATCGACGCCAAGGAAGAAGA... | 354 | [
"352",
"351",
"357"
] | PCR-primers-len | hf-carbon/natural-plasmids |
94823cc0-be5d-4331-a948-5910b56193cc | What is the expected length of the PCR amplicon produced using the primers AGCTTTTTGTAAGGGGTTAA and ATTAATTCAAGACAATAAAT on the template TGTAATAACAAATTTTCTCGCTTTAATAAGCTTTAAATAAGCTTTTAAAGAAATATCTTTTCCAACGCTAAAAAAGGTTTGAAGATATTTATCATCAATTAGCTTGTGACGATTAAATAGAAATAAAGCAATTATATCATTTTCAACTTTTAAAAATAAAGGTTCTTTGTACCTTAAATTCCA... | 141 | [
"282",
"144",
"142"
] | PCR-primers-len | hf-carbon/natural-plasmids |
463c5525-fc1b-45ca-ab16-e74c0fe6a7df | What is the expected length of the PCR amplicon produced using the primers GCGCAAAGGACAGGCTCGCC and AAGATTGGCGGCAGTCAGAG on the template GCACTGTCGATTTTTATCTCTCCTCCCGTCGTAACAGCAAAGCTGCATACCGGTTTCTGGGTAAAATCCTCAACAACGTGAAGAAGTGGCAGATCCCGCGATTCATCAACACGGATAAAGCGCCCGCCTATGGTCGCGCGCTTGCTCTGCTCAAACGCGAAGGCCGGTGCCCGTCTGACGTTG... | 187 | [
"188",
"374",
"185"
] | PCR-primers-len | hf-carbon/natural-plasmids |
6b94fdef-e89d-425d-8fda-4deabb0bfac6 | What is the expected length of the PCR amplicon produced using the primers TCCAAACACAAACAGTATAC and AGTAGGTTTGGGGGGATATA on the template TCTGCAGTAGCATTCCATAAACTTTCATGGTCAGCTGCGATTCAAGCTGCTTACAATGCAAGTTCTTGTCATTCATTTAATAGACAATACTCTTAATAAATAAAACAGATAGCAATCAAGAAACTTGACTGCTATCTGTTTTATTGTCTTTTCCCTTTTTAAATAAACAAATCCCTGTTGTAA... | 104 | [
"105",
"208",
"52"
] | PCR-primers-len | hf-carbon/natural-plasmids |
e4f8f16d-a222-4eb4-a8d7-bb35ba175211 | I am cloning a gene into pUC19 using restriction-ligation cloning. I have designed the primer pair GGGGGGTACCCACGGATAGCTTCAGAGAAA and GGGGGCGGCCGCCTAACTATAGAAAAGGTGAA. Which restriction enzymes should I use to digest both the PCR product and the plasmid? | KpnI, NotI | [
"AgeI, SphI",
"BglII, NcoI",
"AgeI, SalI"
] | PCR-geneprimers-enz | hf-carbon/natural-plasmids |
1abc6c93-556d-4134-afca-fe7246ea0883 | I am cloning a gene into pUC19 using restriction-ligation cloning. I have designed the primer pair GGGGTCTAGAGCATAAAAAAACTACTAGAA and GGGGGGTACCTGGATACTATCTTGAACACG. Which restriction enzymes should I use to digest both the PCR product and the plasmid? | KpnI, XbaI | [
"ClaI, HindIII",
"EcoRV, SacI",
"KpnI, NcoI"
] | PCR-geneprimers-enz | hf-carbon/natural-plasmids |
eb2559b2-2c6b-42db-b40c-d87bc6541c6b | I am cloning a gene into pUC19 using restriction-ligation cloning. I have designed the primer pair GGGGGTCGACGGTGCCGGCGTTCCCATTAC and GGGGGAGCTCCCGTCTTAACTCGCTGCAAG. Which restriction enzymes should I use to digest both the PCR product and the plasmid? | SacI, SalI | [
"HindIII, SpeI",
"EcoRV, KpnI",
"BglII, XbaI"
] | PCR-geneprimers-enz | hf-carbon/natural-plasmids |
8e441e79-ab70-45aa-8e23-62cfa133b517 | I am cloning a gene into pUC19 using restriction-ligation cloning. I have designed the primer pair GGGGAGATCTAATCGAGCACGTCGAACCCT and GGGGGATATCAGCATGGCGAATCGCATACT. Which restriction enzymes should I use to digest both the PCR product and the plasmid? | BglII, EcoRV | [
"KpnI, NotI",
"EcoRI, NdeI",
"EcoRV, SalI"
] | PCR-geneprimers-enz | hf-carbon/natural-plasmids |
3e84c886-234c-46fe-a861-292fcdc13cba | I am cloning a gene into pUC19 using restriction-ligation cloning. I have designed the primer pair GGGGACTAGTTCAAACAAACAATTAAGAGA and GGGGCCATGGTATCACGAAGTCTGACAGTG. Which restriction enzymes should I use to digest both the PCR product and the plasmid? | NcoI, SpeI | [
"EcoRV, NcoI",
"SacI, SpeI",
"NotI, PstI"
] | PCR-geneprimers-enz | hf-carbon/natural-plasmids |
4d58e97b-3872-4702-8a8e-935119225189 | I want to clone the sucA gene from E. coli into the plasmid pUC19 using restriction-ligation cloning. Which of the following primer pairs should I use to do the cloning with the enzymes SmaI and SacI? | GGGGCCCGGGATGCAGAACAGCGCTTTGAA, GGGGGAGCTCTTATTCGACGTTCAGCGCGT | [
"GGGGCTCGAGATGCAGAACAGCGCTTTGAA, GGGGGGTACCTTATTCGACGTTCAGCGCGT",
"GGGGGAGCTCTTATTCGACGTTCAGCGCGT, GGGGCCCGGGATGCAGAACAGCGCTTTGAA",
"GGGGCCCGGGATGCAGAACAGCGCT, GGGGGAGCTCTTATTCGACGTTCAGCGCGT"
] | PCR-gene-enzprimers | NCBI |
27f5042e-45f8-4769-8554-b712dd6bb080 | I want to clone the cheA gene from E. coli into the plasmid pUC19 using restriction-ligation cloning. Which of the following primer pairs should I use to do the cloning with the enzymes SphI and SacI? | GGGGGCATGCTCACATGCCCAGTTTCTCAA, GGGGGAGCTCATGGCGGATAAAGAACTTAA | [
"GGGGGCATGCACTTATTGAGAGCGTCGACG, GGGGGAGCTCATGGCGGATAAAGAACTTAA",
"GGGGGCATGCCGCTTCTGCAGTCACCATTA, GGGGGAGCTCATGGCGGATAAAGAACTTAA",
"GGGGGAGCTCATGGCGGATAAAGAACTTAA, GGGGGCATGCTCACATGCCCAGTTTCTCAA"
] | PCR-gene-enzprimers | NCBI |
0a3aa684-a14a-4221-8c98-4c52ba266bec | I want to clone the lexA gene from E. coli into the plasmid pUC19 using restriction-ligation cloning. Which of the following primer pairs should I use to do the cloning with the enzymes SacI and PstI? | GGGGGAGCTCATGAAAGCGTTAACGGCCAG, GGGGCTGCAGTTACAGCCAGTCGCCGTTGC | [
"GGGGTCTAGAATGAAAGCGTTAACGGCCAG, GGGGGCTAGCTTACAGCCAGTCGCCGTTGC",
"GGGGGAGCTCGGCTGCCGGTGAACCACTTC, GGGGCTGCAGTTACAGCCAGTCGCCGTTGC",
"GGGGGAGCTCATGAAAGCGTTAACG, GGGGCTGCAGTTACAGCCAGTCGCCGTTGC"
] | PCR-gene-enzprimers | NCBI |
804b395b-379c-4580-87ca-160fcc9ee010 | I want to clone the rpoB gene from E. coli into the plasmid pUC19 using restriction-ligation cloning. Which of the following primer pairs should I use to do the cloning with the enzymes BamHI and HindIII? | GGGGGGATCCATGGTTTACTCCTATACCGA, GGGGAAGCTTTTACTCGTCTTCCAGTTCGA | [
"GGGGGGATCCATTTCCGCAGCAGTGAAAGA, GGGGAAGCTTTTACTCGTCTTCCAGTTCGA",
"GGGGAGATCTATGGTTTACTCCTATACCGA, GGGGGGTACCTTACTCGTCTTCCAGTTCGA",
"GGGGAAGCTTTTACTCGTCTTCCAGTTCGA, GGGGGGATCCATGGTTTACTCCTATACCGA"
] | PCR-gene-enzprimers | NCBI |
3e04a709-cfec-46b8-9ac5-a42cc72ddf39 | I want to clone the murA gene from E. coli into the plasmid pUC19 using restriction-ligation cloning. Which of the following primer pairs should I use to do the cloning with the enzymes EcoRI and XbaI? | GGGGGAATTCATGTCTGAATCTGTACAGAG, GGGGTCTAGATTACGCCTCCAGTGCCGGAT | [
"GGGGGAATTCACCGCAATGGATGGCAGTGA, GGGGTCTAGATTACGCCTCCAGTGCCGGAT",
"GGGGGAATTCCGGCGACTCCATTACCGTTG, GGGGTCTAGATTACGCCTCCAGTGCCGGAT",
"GGGGGAATTCTTTCTGAAGGGCTGGAGCAA, GGGGTCTAGATTACGCCTCCAGTGCCGGAT"
] | PCR-gene-enzprimers | NCBI |
f26465a3-527b-43a5-9070-e739f507ea28 | I want to clone the tufA gene from E. coli into the plasmid pUC19 using Gibson assembly. The vector has been linearized with HindIII. Which of the following primer pairs should I use? | GAGTCGACCTGCAGGCATGCATGGCTAAACTGACCAAGCG, GCTATGACCATGATTACGCCTTAGTTTACAGAAGCGCTCA | [
"CGGTACCCGGGGATCCTCTAATGGCTAAACTGACCAAGCG, ACAATTTCACACAGGAAACATTAGTTTACAGAAGCGCTCA",
"GAGTCGACCTGCAGGCATGCCGGATGCAATGCGCGTTGTT, GCTATGACCATGATTACGCCAGAACCTGGCCCAGCTGGCC",
"GGGGGGTACCATGGCTAAACTGACCAAGCG, GGGGCCCGGGTTAGTTTACAGAAGCGCTCA"
] | PCR-gene-gibshindprimers | NCBI |
5a0dbf8e-c543-4f1f-987a-855446243663 | I want to clone the atpA gene from E. coli into the plasmid pUC19 using Gibson assembly. The vector has been linearized with HindIII. Which of the following primer pairs should I use? | GAGTCGACCTGCAGGCATGCTTACCAGGATTGGGTTGCTT, GCTATGACCATGATTACGCCATGCAACTGAATTCCACCGA | [
"CGGTACCCGGGGATCCTCTATTACCAGGATTGGGTTGCTT, ACAATTTCACACAGGAAACAATGCAACTGAATTCCACCGA",
"GAGTCGACCTGCAGGCATGCCAGCGCATCTTCACCGCGGT, GCTATGACCATGATTACGCCAATGGGCGAATACTTCCGTG",
"GGGGCATATGTTACCAGGATTGGGTTGCTT, GGGGGCGGCCGCATGCAACTGAATTCCACCGA"
] | PCR-gene-gibshindprimers | NCBI |
0f7f60e2-7112-43b5-a2f3-10a76ba8420c | I want to clone the dnaA gene from E. coli into the plasmid pUC19 using Gibson assembly. The vector has been linearized with HindIII. Which of the following primer pairs should I use? | GAGTCGACCTGCAGGCATGCCTGACCGCTTTAACCCCATT, GCTATGACCATGATTACGCCTCAGCATTGTAGTGAGGAAC | [
"CGGTACCCGGGGATCCTCTACTGACCGCTTTAACCCCATT, ACAATTTCACACAGGAAACATCAGCATTGTAGTGAGGAAC",
"GAGTCGACCTGCAGGCATGCTTTCAAACGTAGACATCTCT, GCTATGACCATGATTACGCCTTGAAGCTGAAAGCCGACAA",
"GGGGCCATGGCTGACCGCTTTAACCCCATT, GGGGGCGGCCGCTCAGCATTGTAGTGAGGAAC"
] | PCR-gene-gibshindprimers | NCBI |
f80017ef-a0f2-4847-86a3-64db60b01990 | I want to clone the cheA gene from E. coli into the plasmid pUC19 using Gibson assembly. The vector has been linearized with HindIII. Which of the following primer pairs should I use? | GAGTCGACCTGCAGGCATGCTCACATGCCCAGTTTCTCAA, GCTATGACCATGATTACGCCATGGCGGATAAAGAACTTAA | [
"CGGTACCCGGGGATCCTCTATCACATGCCCAGTTTCTCAA, ACAATTTCACACAGGAAACAATGGCGGATAAAGAACTTAA",
"GAGTCGACCTGCAGGCATGCGCCATCCATATTGGGCATGT, GCTATGACCATGATTACGCCATTTGTTATCTCCGACTGGA",
"GGGGACCGGTTCACATGCCCAGTTTCTCAA, GGGGGCGGCCGCATGGCGGATAAAGAACTTAA"
] | PCR-gene-gibshindprimers | NCBI |
db013c14-527a-43d6-98d5-71375a521990 | I want to clone the trpB gene from E. coli into the plasmid pUC19 using Gibson assembly. The vector has been linearized with HindIII. Which of the following primer pairs should I use? | GAGTCGACCTGCAGGCATGCATGGACAGATTCCCACGTTC, GCTATGACCATGATTACGCCTTAACGGCGGTTGCCGAAGA | [
"CGGTACCCGGGGATCCTCTAATGGACAGATTCCCACGTTC, ACAATTTCACACAGGAAACATTAACGGCGGTTGCCGAAGA",
"GAGTCGACCTGCAGGCATGCTTACTGCCGGGATGTTCGGC, GCTATGACCATGATTACGCCTAACCGTACAGGCTCATTGC",
"GGGGGGATCCATGGACAGATTCCCACGTTC, GGGGGTCGACTTAACGGCGGTTGCCGAAGA"
] | PCR-gene-gibshindprimers | NCBI |
56aa7321-47bc-42c6-8e16-df30adb94869 | I want to clone the purA gene from E. coli into the plasmid pUC19 using Gibson assembly. The vector has been linearized with SmaI. Which of the following primer pairs should I use? | CAGTGAATTCGAGCTCGGTATTAAACAGGATCTGCATTGC, CAGGTCGACTCTAGAGGATCATGAATGACCGTGACTTTAT | [
"CAGTGAATTCGAGCTCGGTAGGTACAGTCGAGCACCACAT, CAGGTCGACTCTAGAGGATCAGATGCGGTTGCACGGGCCG",
"GGGGGAGCTCTTAAACAGGATCTGCATTGC, GGGGGGATCCATGAATGACCGTGACTTTAT",
"CTATGTTTTTCCATCTAGGATGGCCGCGCAATTGGCAAGA, CCACAACCGCGGGAATGATTTTATTCTTTCGGCAATGGGC"
] | PCR-gene-gibssmaprimers | NCBI |
725a95ce-e918-4fe8-9021-b68779670f46 | I want to clone the aceE gene from E. coli into the plasmid pUC19 using Gibson assembly. The vector has been linearized with SmaI. Which of the following primer pairs should I use? | CAGTGAATTCGAGCTCGGTAATGTCAGAACGTTTCCCAAA, CAGGTCGACTCTAGAGGATCTTACGCCAGACGCGGGTTAA | [
"CAGTGAATTCGAGCTCGGTAGGTTCTGAAGAGCATACCTA, CAGGTCGACTCTAGAGGATCTCTGACGCTGAGCGTGCAGA",
"GGGGCATATGATGTCAGAACGTTTCCCAAA, GGGGCATATGTTACGCCAGACGCGGGTTAA",
"AGGAAATGCGCGCAGCGGACGTAGACACCGTTATACTTCT, GGCCTCGTAATATGTAACTGAACTGGCACAAGTGGGTGAA"
] | PCR-gene-gibssmaprimers | NCBI |
6e321ed3-e8c0-4ce1-8cf7-4c9f89aeefef | I want to clone the phoA gene from E. coli into the plasmid pUC19 using Gibson assembly. The vector has been linearized with SmaI. Which of the following primer pairs should I use? | CAGTGAATTCGAGCTCGGTATTGTCACGGCCGAGACTTAT, CAGGTCGACTCTAGAGGATCTTATTTCAGCCCCAGAGCGG | [
"CAGTGAATTCGAGCTCGGTACGCTTGGCGGCGGCGCAAAA, CAGGTCGACTCTAGAGGATCGTTGCCGTTTCAGCAAAGGT",
"GGGGGAATTCTTGTCACGGCCGAGACTTAT, GGGGCTCGAGTTATTTCAGCCCCAGAGCGG",
"TCACAACCTGCACCGATCTGTCTAAAGATCGATCCGCTAA, GCCTTTAACGGGCCGCAATAAGCCGTCAAGACCGGGTTGG"
] | PCR-gene-gibssmaprimers | NCBI |
87cd5742-25d7-40b3-99b9-4581282d0ab1 | I want to clone the agp gene from E. coli into the plasmid pUC19 using Gibson assembly. The vector has been linearized with SmaI. Which of the following primer pairs should I use? | CAGTGAATTCGAGCTCGGTAATGAACAAAACGCTAATCGC, CAGGTCGACTCTAGAGGATCTTATTTCACCGCTTCATTCA | [
"CAGTGAATTCGAGCTCGGTAAAAAATACCTTTAGCGCCAA, CAGGTCGACTCTAGAGGATCCACCTGGTTCTTGTTGATAC",
"GGGGGAGCTCATGAACAAAACGCTAATCGC, GGGGGGATCCTTATTTCACCGCTTCATTCA",
"CAAGTTGTGTGCCGGAAGGGCCTCGTTTATGGAATGCTTA, TCGACCAGTACAACGGATAACTTAAAACAACACTCACCTT"
] | PCR-gene-gibssmaprimers | NCBI |
4e0ebf9c-577e-4665-a474-f32862cbe4ae | I want to clone the dnaK gene from E. coli into the plasmid pUC19 using Gibson assembly. The vector has been linearized with SmaI. Which of the following primer pairs should I use? | CAGTGAATTCGAGCTCGGTAATGGGTAAAATAATTGGTAT, CAGGTCGACTCTAGAGGATCTTATTTTTTGTCTTTGACTT | [
"CAGTGAATTCGAGCTCGGTATGAAAGTTGCACTGCAGGAC, CAGGTCGACTCTAGAGGATCTCAGATACGGACAGGCCAGC",
"GGGGCCATGGATGGGTAAAATAATTGGTAT, GGGGGCGGCCGCTTATTTTTTGTCTTTGACTT",
"TTGCGAACCGTTTCTAGTTGAGCAGTCGCGACTCAGGAGA, ACTAGAGCTATATTGGTGAGGTCACGACCGCGGAATTGAG"
] | PCR-gene-gibssmaprimers | NCBI |
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