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Remove old README_universal_v2.md (renamed to main_benchmark)
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Remove old eval/aggregate_universal_v2.py (renamed to main_benchmark)
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Remove old eval/universal_v2_evaluate.py (renamed to main_benchmark)
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Remove old bench/universal_v2 (renamed to bench/main_benchmark)
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Rename universal_v2 -> main_benchmark (scripts, bench/ dir, env vars SF_MAIN_BENCH_*, README)
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Add universal_v2 benchmark scoring (universal_v2_evaluate + aggregate) + 60-case reference structures/annotations/cases.yaml (paths scrubbed; CPU-only; reproduces hit flags 2594/2594)
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README: add 'Reproducing the main benchmark' section (CPU reproduce_benchmark.py)
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Add benchmark reproduction: CPU scoring/eval (evaluate_prediction+batch_eval), reference structures, region manifests, headline prediction sets, reproduce_benchmark.py (reproduces main minority_hit_rate table; 15/15 cells verified by re-scoring 1440 PDBs)
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Add NOTICE (third-party attribution); scrub internal paths from demo provenance; fix project URLs to ChatterjeeLab org
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Add Colab badge + demo link
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Add Colab demo notebook + KaiB demo data
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Initial OSS release: mosaic + gradient subset builders (verified KaiB 95.0%, GA98 92.5%, GB98 50.0% on Phase XII pilot)
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initial commit
